The following utilities are written in JavaScript and should run on any browser having the JavaScript option enabled.
Mongo Oligo Mass Calculator
The ultimate oligonucleotide mass calculator, calculates also electrospray series, CID fragments, endo- and exonuclease fragments. Includes the possibility for calculating modified residues.
Oligo II
Oligonucleotide mass calculator, uses compositions as input.
Oligo Composition Calculator
Finds nucleotide compositions from a given mass. User defined residues can be included.
MolE
Calculates molecular masses and isotope ratios from elemental compositions.
ElComp
Calculates elemental compositions from a given molecular mass.
software
SOS 1.0
SOS (Simple Oligonucleotide Sequencer) is an interactive tool for manual sequencing of oligonucleotides. It has a graphical interface and allows to determine oligonucleotide sequences from CID MS/MS data. It uses mass/intensity lists as input. Allows to check for the presence of modified residues. Runs on Windows 3.xx, WIN95/98 and WINNT computers. Is available now!
See: JASMS 2002, 13, 200-203.
If you are interested in the program, please contact Jef Rozenski.